+ '[' -z '' ']' + case "$-" in + __lmod_vx=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/opt/ohpc/admin/lmod/lmod/init/bash) Shell debugging restarted + unset __lmod_vx + export executable=init_atmosphere_model + executable=init_atmosphere_model + ulimit -c unlimited + ulimit -v unlimited + ulimit -s unlimited + . /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/scripts/setenv.bash ++ module purge ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load ohpc ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load phdf5 ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load netcdf ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load netcdf-fortran ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load cdo-2.0.4-gcc-9.4.0-bjulvnd ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load opengrads/2.2.1 ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load nco-5.0.1-gcc-11.2.0-u37c3hb ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module load metis ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 ++ module list ++ '[' -z '' ']' ++ case "$-" in ++ __lmod_sh_dbg=x ++ '[' -n x ']' ++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted ++ unset __lmod_sh_dbg ++ return 0 +++++ pwd ++++ dirname /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/run.2024011700 +++ dirname /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT ++ export DIR_SCRIPTS=/mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP ++ DIR_SCRIPTS=/mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP +++++ pwd ++++ dirname /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/run.2024011700 +++ dirname /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT ++ export DIR_DADOS=/mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP ++ DIR_DADOS=/mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP ++ export MONANDIR=/mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/sources/MONAN-Model_1.4.3-rc ++ MONANDIR=/mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/sources/MONAN-Model_1.4.3-rc ++ export STATIC_QUEUE=batch ++ STATIC_QUEUE=batch ++ export STATIC_ncores=32 ++ STATIC_ncores=32 ++ export STATIC_nnodes=1 ++ STATIC_nnodes=1 ++ export STATIC_ncpn=32 ++ STATIC_ncpn=32 ++ export STATIC_jobname=Pre.static ++ STATIC_jobname=Pre.static ++ export STATIC_walltime=02:00:00 ++ STATIC_walltime=02:00:00 ++ export DEGRIB_QUEUE=batch ++ DEGRIB_QUEUE=batch ++ export DEGRIB_ncores=1 ++ DEGRIB_ncores=1 ++ export DEGRIB_nnodes=1 ++ DEGRIB_nnodes=1 ++ export DEGRIB_ncpn=1 ++ DEGRIB_ncpn=1 ++ export DEGRIB_jobname=Pre.degrib ++ DEGRIB_jobname=Pre.degrib ++ export INITATMOS_QUEUE=batch ++ INITATMOS_QUEUE=batch ++ export INITATMOS_ncores=64 ++ INITATMOS_ncores=64 ++ export INITATMOS_nnodes=1 ++ INITATMOS_nnodes=1 ++ export INITATMOS_jobname=Pre.InitAtmos ++ INITATMOS_jobname=Pre.InitAtmos ++ export LBCS_QUEUE=batch ++ LBCS_QUEUE=batch ++ export LBCS_ncores=64 ++ LBCS_ncores=64 ++ export LBCS_nnodes=1 ++ LBCS_nnodes=1 ++ export LBCS_jobname=Pre.LBCS ++ LBCS_jobname=Pre.LBCS ++ export MODEL_QUEUE=batch ++ MODEL_QUEUE=batch ++ export MODEL_ncores=256 ++ MODEL_ncores=256 ++ export MODEL_nnodes=4 ++ MODEL_nnodes=4 ++ export MODEL_ncpn=64 ++ MODEL_ncpn=64 ++ export MODEL_jobname=Model.MONAN ++ MODEL_jobname=Model.MONAN ++ export MODEL_walltime=8:00:00 ++ MODEL_walltime=8:00:00 ++ export POST_QUEUE=batch ++ POST_QUEUE=batch ++ export POST_nnodes=1 ++ POST_nnodes=1 ++ export POST_ncpn=32 ++ POST_ncpn=32 ++ export POST_jobname=Post.MONAN ++ POST_jobname=Post.MONAN ++ export POST_walltime=8:00:00 ++ POST_walltime=8:00:00 ++ export PRODS_QUEUE=batch ++ PRODS_QUEUE=batch ++ export PRODS_ncores=1 ++ PRODS_ncores=1 ++ export PRODS_nnodes=1 ++ PRODS_nnodes=1 ++ export PRODS_ncpn=1 ++ PRODS_ncpn=1 ++ export PRODS_jobname=Prods.MONAN ++ PRODS_jobname=Prods.MONAN ++ export PRODS_walltime=8:00:00 ++ PRODS_walltime=8:00:00 ++ export OMP_NUM_THREADS=1 ++ OMP_NUM_THREADS=1 ++ export OMPI_MCA_btl_openib_allow_ib=1 ++ OMPI_MCA_btl_openib_allow_ib=1 ++ export OMPI_MCA_btl_openib_if_include=mlx5_0:1 ++ OMPI_MCA_btl_openib_if_include=mlx5_0:1 ++ export PMIX_MCA_gds=hash ++ PMIX_MCA_gds=hash ++ export 'MPI_PARAMS=-iface ib0 -bind-to core -map-by core' ++ MPI_PARAMS='-iface ib0 -bind-to core -map-by core' ++ export NETCDF=/mnt/beegfs/monan/libs_openmpi/netcdf ++ NETCDF=/mnt/beegfs/monan/libs_openmpi/netcdf ++ export PNETCDF=/mnt/beegfs/monan/libs_openmpi/PnetCDF ++ PNETCDF=/mnt/beegfs/monan/libs_openmpi/PnetCDF ++ export NETCDFDIR=/mnt/beegfs/monan/libs_openmpi/netcdf ++ NETCDFDIR=/mnt/beegfs/monan/libs_openmpi/netcdf ++ export PNETCDFDIR=/mnt/beegfs/monan/libs_openmpi/PnetCDF ++ PNETCDFDIR=/mnt/beegfs/monan/libs_openmpi/PnetCDF ++ export DIRDADOS=/mnt/beegfs/monan/dados/MONAN_v1.4.x ++ DIRDADOS=/mnt/beegfs/monan/dados/MONAN_v1.4.x ++ export OPERDIR=/oper/dados/ioper/tempo ++ OPERDIR=/oper/dados/ioper/tempo ++ export 'GREEN=\033[1;32m' ++ GREEN='\033[1;32m' ++ export 'RED=\033[1;31m' ++ RED='\033[1;31m' ++ export 'NC=\033[0m' ++ NC='\033[0m' ++ export 'BLUE=\033[01;34m' ++ BLUE='\033[01;34m' + cd /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/run.2024011700 + date + mpirun -np 64 ./init_atmosphere_model Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL real 1m24,259s user 74m53,686s sys 4m43,194s + date + mv /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/run.2024011700/log.init_atmosphere.0000.out /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/dataout/2024011700/Pre/logs/log.init_atmosphere.0000.circle_ellipse.init.nc.2024011700.out + mv /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/run.2024011700/namelist.init_atmosphere /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/dataout/2024011700/Pre/logs + mv /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/run.2024011700/streams.init_atmosphere /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/dataout/2024011700/Pre/logs + mv /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/run.2024011700/circle_ellipse.init.nc /mnt/beegfs/guilherme.mendonca/scripts_CD-CT_CGFD_USP/scripts_CD-CT/dataout/2024011700/Pre